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[[TableOfContents]] | <<TableOfContents>> |
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=== Error when compiling Ptolemy II (Windows only) === If running |
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{{{ make configPt }}} or running {{{ ./configure && make fast install }}} gives the following error {{{ /bin/sh: -c: line 1: unexpected EOF while looking for matching `'' /bin/sh: -c: line 4: syntax error: unexpected end of file }}} then the source code is most likely with Unix line endings. Download the Windows source code from the Ptolemy web page. === Error when compiling MATLAB (Windows only) === |
=== Error when compiling MATLAB === ==== Windows ==== |
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=== Error when compiling MATLAB (Mac OS X with Matlab R2009a only) === Under Mac OS X, if the BCVTB is compiled in Matlab R2009a, the following error may occur: |
==== Linux Ubuntu 10.10 64-bit ==== In MATLAB R2010b, the command {{{ cd lib/matlab ant all }}} may fail with the error message {{{ Warning: You are using gcc version "4.4.4-14ubuntu5)". The version [exec] currently supported with MEX is "4.3.4". [exec] For a list of currently supported compilers see: [exec] http://www.mathworks.com/support/compilers/current_release/ [exec] [exec] /usr/bin/ld: cannot find -lstdc++ [exec] collect2: ld returned 1 exit status [exec] [exec] mex: link of ' "establishBSDSocket.mexa64"' failed. [exec] [exec] ??? Error using ==> mex at 208 [exec] Unable to complete successfully. [exec] [exec] Error in ==> [exec] /usr/local/matlab/R2010b/toolbox/simulink/simuli>> nk/+legacycode/@LCT/compile.p>compile [exec] at 264 [exec] [exec] [exec] Error in ==> [exec] /usr/local/matlab/R2010b/toolbox/simulink/simulink/+legacycode/@LCT/legacyCodeImpl.p>legacyCodeImpl [exec] at 84 [exec] [exec] [exec] Error in ==> legacy_code at 87 [exec] [varargout{1:nargout}] = legacycode.LCT.legacyCodeImpl(action, [exec] varargin{1:end}); [exec] [exec] Error in ==> compile at 90 [exec] legacy_code('compile', def, ... [exec] }}} This problem is caused by {{{/usr/bin/ld}}} not finding the {{{stdc++}}} library. As a work-around, proceed as follows: |
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Undefined symbols: "_mxGetM", referenced from: _mexFunction in establishBSDSocket.o "_mxGetN", referenced from: _mexFunction in establishBSDSocket.o "_mxIsNumeric", referenced from: _mexFunction in establishBSDSocket.o "_mxGetClassID", referenced from: _ssGetDTypeIdFromMxArray in establishBSDSocket.o "_mxCalloc", referenced from: __RegNumInputPortsCB in establishBSDSocket.o __RegNumOutputPortsCB in establishBSDSocket.o _mexFunction in establishBSDSocket.o "_mxGetPr", referenced from: _mexFunction in establishBSDSocket.o "_mxIsComplex", referenced from: _mexFunction in establishBSDSocket.o "_mxCreateDoubleMatrix_700", referenced from: _mexFunction in establishBSDSocket.o ld: symbol(s) not found collect2: ld returned 1 exit status mex: link of ' "establishBSDSocket.mexmaci"' failed. ??? Error using ==> mex at 218 Unable to complete successfully. Error in ==> /Applications/MATLAB_R2009a.app/toolbox/simulink/simulink/+legacycode/@LCT/compile.p>compile at 261 Error in ==> /Applications/MATLAB_R2009a.app/toolbox/simulink/simulink/legacy_code.p>legacy_code at 91 Error in ==> compile at 58 legacy_code('compile', def, ... |
sudo emacs ~/.matlab/R2010b/mexopts.sh |
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This problem is caused because the linker flags in Matlab changed in R2009a. To fix this problem, open the file {{{bcvtb/lib/simulink/compile.m}}} and remove the entry | In the section {{{ glnxa64) }}}, change the line {{{ CLIBS="$CLIBS -lstdc++" }}} to {{{ CLIBS="$CLIBS" }}} Now, the command {{{ant all}}} should work and produce the files {{{libbcvtb_thunk_glnxa64.so}}}, {{{establishBSDSocket.mexa64}}}, {{{exchangeDoublesWithBSDSocket.mexa64}}} and {{{closeBSDSocket.mexa64}}}. |
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{{{ -L/usr/lib }}} Then, recompile the file. This will be fixed in releases after version 0.1.1. |
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=== Check program output === By default, the {{{Simulation}}} actor in Ptolemy writes a copy of the console output of the simulation program to a file called {{{simulation.log}}}. This file can typically be found in the directory from which the simulation program has been started. |
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For each simulation, the BCVTB will write a log file that contains the console output of the simulation program. The name of the simulation log file is determined by parameter {{{simulationLogFile}}} of the {{{Simulator}}} actor, with the default name being {{{simulation.log}}}. Check this file for possible error messages. === Investigate program output === Depending on how simulation programs are called by the {{{Simulation}}} actor in Ptolemy, the console output written by the simulation program may not be visible. To see the console output, change the command line of the Ptolemy actor from {{{ bash ./runClient.sh }}} to {{{ xterm -e bash ./runClient.sh }}} This will start a terminal that shows the output of the running simulation program which help analyzing what goes wrong, for example, when the simulation program terminates due to an error before connecting to the BCVTB. === Investigate log files === |
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Then, from the directory {{{bcvtb/lib}}} compile the libraries using {{{ make clean make |
Then, from the directory {{{bcvtb/lib/util}}} compile the libraries using{{{ ant clean all |
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=== Memory problem === If the following error occurs:{{{ java.lang.OutOfMemoryError: Java heap space}}} then increase the Java heap space by running vergil with the command{{{ java -jar path_to_bcvtb\bin\BCVTB.jar -Xmx1024m system.xml}}} The argument {{{-Xmx1024m}}} declares how much memory is allocated. The default for Java is -Xmx128m === Wrong Java version === The following error occurs if a too old Java version is used:{{{ java.lang.UnsupportedClassVersionError: Bad version number in .class file}}} To fix this problem, update your Java. |
Help
Contents
1. Compilation problems
1.1. Error when compiling MATLAB
1.1.1. Windows
Under Windows, if the BCVTB is compiled using the Microsoft compiler, then the MATLAB libraries also need to be compiled with the Microsoft compiler. If, however, the gcc compiler has been used when compiling the BCVTB, then the following compilation error may be obtained when compiling the MATLAB libraries:
Writing library for establishBSDSocket.mexw32 c:\docume~1\mwetter\locals~1\temp\mex_ae679\simulinksocket.obj .text: undefined reference to '_establishclientsocket' c:\docume~1\mwetter\locals~1\temp\mex_ae679\simulinksocket.obj .text: undefined reference to '_exchangewithsocket' c:\docume~1\mwetter\locals~1\temp\mex_ae679\simulinksocket.obj .text: undefined reference to '_closeipc'
To fix this problem, open Matlab, run
mex -setup
and select the Microsoft Visual C++ compiler from the menu. This need to be done only once as it updates your Matlab settings.
1.1.2. Linux Ubuntu 10.10 64-bit
In MATLAB R2010b, the command
cd lib/matlab ant all
may fail with the error message
Warning: You are using gcc version "4.4.4-14ubuntu5)". The version [exec] currently supported with MEX is "4.3.4". [exec] For a list of currently supported compilers see: [exec] http://www.mathworks.com/support/compilers/current_release/ [exec] [exec] /usr/bin/ld: cannot find -lstdc++ [exec] collect2: ld returned 1 exit status [exec] [exec] mex: link of ' "establishBSDSocket.mexa64"' failed. [exec] [exec] ??? Error using ==> mex at 208 [exec] Unable to complete successfully. [exec] [exec] Error in ==> [exec] /usr/local/matlab/R2010b/toolbox/simulink/simuli>> nk/+legacycode/@LCT/compile.p>compile [exec] at 264 [exec] [exec] [exec] Error in ==> [exec] /usr/local/matlab/R2010b/toolbox/simulink/simulink/+legacycode/@LCT/legacyCodeImpl.p>legacyCodeImpl [exec] at 84 [exec] [exec] [exec] Error in ==> legacy_code at 87 [exec] [varargout{1:nargout}] = legacycode.LCT.legacyCodeImpl(action, [exec] varargin{1:end}); [exec] [exec] Error in ==> compile at 90 [exec] legacy_code('compile', def, ... [exec]
This problem is caused by /usr/bin/ld not finding the stdc++ library. As a work-around, proceed as follows:
Type
sudo emacs ~/.matlab/R2010b/mexopts.sh
In the section glnxa64) , change the line
CLIBS="$CLIBS -lstdc++"
to
CLIBS="$CLIBS"
Now, the command ant all should work and produce the files libbcvtb_thunk_glnxa64.so, establishBSDSocket.mexa64, exchangeDoublesWithBSDSocket.mexa64 and closeBSDSocket.mexa64.
2. Runtime problems
The following steps typically help analyzing problems if a simulation program does not work as expected.
2.1. Check program output
By default, the Simulation actor in Ptolemy writes a copy of the console output of the simulation program to a file called simulation.log. This file can typically be found in the directory from which the simulation program has been started.
2.2. Check log files
If something goes wrong during the simulation, check the files simulation.log, utilSocket.log and utilClient.log. They contain log messages that may indicate the cause of the problem. If these files do not exist, go to the directory bcvtb/lib, open the file defines.h and add the line
#define NDEBUG
Then, from the directory bcvtb/lib/util compile the libraries using
ant clean all
and rerun the simulation. Now the log files should be written to the directory from which you started the BCVTB.
2.3. Memory problem
If the following error occurs:
java.lang.OutOfMemoryError: Java heap space
then increase the Java heap space by running vergil with the command
java -jar path_to_bcvtb\bin\BCVTB.jar -Xmx1024m system.xml
The argument -Xmx1024m declares how much memory is allocated. The default for Java is -Xmx128m
2.4. Wrong Java version
The following error occurs if a too old Java version is used:
java.lang.UnsupportedClassVersionError: Bad version number in .class file
To fix this problem, update your Java.